Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNX4O95219 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SNX4O95219 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNX4O95219 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNX4O95219 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SNX4O95219 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNX4O95219 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SNX4O95219 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNX4O95219 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNX4O95219 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
SNX4O95219 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.33■□□□□ 0.05
SNX4O95219 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
SNX4O95219 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
SNX4O95219 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNX4O95219 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNX4O95219 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 PMS2P4-201ENST00000412466 1052 ntBASIC15.33■□□□□ 0.04
SNX4O95219 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX4O95219 MIR4492-201ENST00000581627 80 ntBASIC15.33■□□□□ 0.04
SNX4O95219 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.33■□□□□ 0.04
SNX4O95219 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX4O95219 AC013467.2-201ENST00000605472 835 ntBASIC15.33■□□□□ 0.04
SNX4O95219 AL078644.1-201ENST00000609881 752 ntBASIC15.33■□□□□ 0.04
SNX4O95219 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX4O95219 AL161645.1-201ENST00000622716 1255 ntBASIC15.33■□□□□ 0.04
SNX4O95219 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.33■□□□□ 0.04
SNX4O95219 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SNX4O95219 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.33■□□□□ 0.04
SNX4O95219 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNX4O95219 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.33■□□□□ 0.04
SNX4O95219 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.32■□□□□ 0.04
SNX4O95219 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX4O95219 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.32■□□□□ 0.04
SNX4O95219 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.32■□□□□ 0.04
SNX4O95219 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 CEND1P1-201ENST00000451006 455 ntBASIC15.32■□□□□ 0.04
SNX4O95219 AC004967.1-201ENST00000453589 447 ntBASIC15.32■□□□□ 0.04
SNX4O95219 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 ALG1L5P-201ENST00000482043 771 ntBASIC15.32■□□□□ 0.04
SNX4O95219 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.32■□□□□ 0.04
SNX4O95219 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 FAM86C2P-203ENST00000528684 1004 ntBASIC15.32■□□□□ 0.04
SNX4O95219 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 AC109635.5-201ENST00000533593 962 ntBASIC15.32■□□□□ 0.04
SNX4O95219 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 MIR4469-201ENST00000583919 79 ntBASIC15.32■□□□□ 0.04
SNX4O95219 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
SNX4O95219 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.32■□□□□ 0.04
SNX4O95219 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.32■□□□□ 0.04
SNX4O95219 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.32■□□□□ 0.04
SNX4O95219 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNX4O95219 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.32■□□□□ 0.04
SNX4O95219 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms