Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC132872.4-202ENST00000622924 2756 ntBASIC15.21■□□□□ 0.03
TRIM3O75382 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.21■□□□□ 0.03
TRIM3O75382 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRIM3O75382 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
TRIM3O75382 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TRIM3O75382 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.21■□□□□ 0.02
TRIM3O75382 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM3O75382 SNX33P1-201ENST00000592116 1762 ntBASIC15.21■□□□□ 0.02
TRIM3O75382 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM3O75382 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.21■□□□□ 0.02
TRIM3O75382 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM3O75382 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRIM3O75382 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 AL391256.1-201ENST00000443260 1855 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 WASH6P-202ENST00000359512 1437 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 SPDYE11-202ENST00000450699 704 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 TIMM8BP1-201ENST00000452384 211 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM3O75382 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM3O75382 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM3O75382 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.2■□□□□ 0.02
TRIM3O75382 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 AC243562.1-201ENST00000560672 389 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 SPDYE9P-201ENST00000570642 692 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 AC004835.2-201ENST00000603762 682 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 SPDYE10P-202ENST00000612005 668 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 SPDYE8P-202ENST00000612377 668 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 AL139011.1-202ENST00000642063 584 ntBASIC15.2■□□□□ 0.02
TRIM3O75382 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRIM3O75382 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.2■□□□□ 0.02
TRIM3O75382 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRIM3O75382 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 KRT8P39-201ENST00000396270 1433 ntBASIC15.19■□□□□ 0.02
TRIM3O75382 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRIM3O75382 AL645728.1-201ENST00000366221 2101 ntBASIC15.19■□□□□ 0.02
TRIM3O75382 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRIM3O75382 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRIM3O75382 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms