Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMAD6O43541 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 AL118508.1-201ENST00000613502 2345 ntBASIC16.33■□□□□ 0.2
SMAD6O43541 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.33■□□□□ 0.2
SMAD6O43541 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.33■□□□□ 0.2
SMAD6O43541 AC002472.2-201ENST00000442739 958 ntBASIC16.33■□□□□ 0.2
SMAD6O43541 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD6O43541 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD6O43541 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.33■□□□□ 0.2
SMAD6O43541 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.33■□□□□ 0.2
SMAD6O43541 AC008738.7-201ENST00000609744 511 ntBASIC16.33■□□□□ 0.2
SMAD6O43541 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SMAD6O43541 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.33■□□□□ 0.2
SMAD6O43541 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMAD6O43541 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD6O43541 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD6O43541 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.33■□□□□ 0.2
SMAD6O43541 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMAD6O43541 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.32■□□□□ 0.2
SMAD6O43541 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD6O43541 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.32■□□□□ 0.2
SMAD6O43541 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.32■□□□□ 0.2
SMAD6O43541 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SMAD6O43541 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD6O43541 HIST3H2BA-201ENST00000436555 524 ntBASIC16.32■□□□□ 0.2
SMAD6O43541 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
SMAD6O43541 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMAD6O43541 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD6O43541 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD6O43541 BNIP3P1-202ENST00000550043 1585 ntBASIC16.32■□□□□ 0.2
SMAD6O43541 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SMAD6O43541 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.32■□□□□ 0.2
SMAD6O43541 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SMAD6O43541 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 AL033527.5-202ENST00000641632 1098 ntBASIC16.32■□□□□ 0.2
SMAD6O43541 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMAD6O43541 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMAD6O43541 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.32■□□□□ 0.2
SMAD6O43541 AC134407.2-201ENST00000625089 1978 ntBASIC16.31■□□□□ 0.2
SMAD6O43541 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMAD6O43541 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.31■□□□□ 0.2
SMAD6O43541 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMAD6O43541 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SMAD6O43541 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMAD6O43541 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms