Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 PCDH8P1-201ENST00000428983 2773 ntBASIC20.62■□□□□ 0.89
KCNQ3O43525 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ3O43525 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ3O43525 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ3O43525 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ3O43525 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ3O43525 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ3O43525 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 AC018892.3-201ENST00000623986 2499 ntBASIC20.62■□□□□ 0.89
KCNQ3O43525 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ3O43525 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNQ3O43525 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNQ3O43525 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.61■□□□□ 0.89
KCNQ3O43525 ATP5G2P4-201ENST00000442175 420 ntBASIC20.61■□□□□ 0.89
KCNQ3O43525 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
KCNQ3O43525 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
KCNQ3O43525 TMEM261P1-201ENST00000604899 340 ntBASIC20.61■□□□□ 0.89
KCNQ3O43525 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KCNQ3O43525 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.61■□□□□ 0.89
KCNQ3O43525 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCNQ3O43525 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC20.6■□□□□ 0.89
KCNQ3O43525 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KCNQ3O43525 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 IGHV3-71-201ENST00000523324 359 ntBASIC20.6■□□□□ 0.89
KCNQ3O43525 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.6■□□□□ 0.89
KCNQ3O43525 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KCNQ3O43525 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.6■□□□□ 0.89
KCNQ3O43525 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KCNQ3O43525 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KCNQ3O43525 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNQ3O43525 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KCNQ3O43525 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
KCNQ3O43525 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 PCDHA14-201ENST00000506751 2298 ntBASIC20.59■□□□□ 0.89
KCNQ3O43525 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KCNQ3O43525 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
KCNQ3O43525 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNQ3O43525 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNQ3O43525 RN7SL399P-201ENST00000471648 279 ntBASIC20.59■□□□□ 0.89
KCNQ3O43525 AC092552.1-201ENST00000547243 906 ntBASIC20.59■□□□□ 0.89
KCNQ3O43525 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.59■□□□□ 0.89
KCNQ3O43525 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.59■□□□□ 0.89
KCNQ3O43525 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNQ3O43525 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNQ3O43525 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
KCNQ3O43525 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.59■□□□□ 0.89
KCNQ3O43525 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KCNQ3O43525 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNQ3O43525 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms