Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CHD1O14646 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CHD1O14646 RGS5-214ENST00000429865 754 ntTSL 3 BASIC25.54■■□□□ 1.68
CHD1O14646 PPOX-204ENST00000462866 473 ntTSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC25.54■■□□□ 1.68
CHD1O14646 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CHD1O14646 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 MIR1227-201ENST00000408484 88 ntBASIC25.54■■□□□ 1.68
CHD1O14646 KLF2P2-201ENST00000416807 1039 ntBASIC25.54■■□□□ 1.68
CHD1O14646 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 FAM8A4P-201ENST00000435433 1213 ntBASIC25.54■■□□□ 1.68
CHD1O14646 PHKG1P2-201ENST00000457537 863 ntBASIC25.54■■□□□ 1.68
CHD1O14646 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC25.54■■□□□ 1.68
CHD1O14646 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC25.54■■□□□ 1.68
CHD1O14646 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC25.54■■□□□ 1.68
CHD1O14646 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC25.54■■□□□ 1.68
CHD1O14646 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC25.54■■□□□ 1.68
CHD1O14646 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC25.54■■□□□ 1.68
CHD1O14646 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC25.54■■□□□ 1.68
CHD1O14646 RN7SL48P-201ENST00000579283 293 ntBASIC25.54■■□□□ 1.68
CHD1O14646 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC25.54■■□□□ 1.68
CHD1O14646 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHD1O14646 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC25.53■■□□□ 1.68
CHD1O14646 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC25.53■■□□□ 1.68
CHD1O14646 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
CHD1O14646 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC25.53■■□□□ 1.68
CHD1O14646 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC25.53■■□□□ 1.68
CHD1O14646 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC25.53■■□□□ 1.68
CHD1O14646 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC25.53■■□□□ 1.68
CHD1O14646 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC25.53■■□□□ 1.68
CHD1O14646 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
CHD1O14646 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC25.53■■□□□ 1.68
CHD1O14646 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHD1O14646 OS9-205ENST00000413095 1660 ntTSL 2 BASIC25.53■■□□□ 1.68
CHD1O14646 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC25.52■■□□□ 1.68
CHD1O14646 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC25.52■■□□□ 1.68
CHD1O14646 AC106794.1-201ENST00000506935 792 ntBASIC25.52■■□□□ 1.68
CHD1O14646 IGHV3-37-201ENST00000518544 340 ntBASIC25.52■■□□□ 1.68
CHD1O14646 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC25.52■■□□□ 1.68
CHD1O14646 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC25.52■■□□□ 1.68
CHD1O14646 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC25.52■■□□□ 1.68
CHD1O14646 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC25.52■■□□□ 1.68
CHD1O14646 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC25.52■■□□□ 1.68
CHD1O14646 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHD1O14646 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC25.52■■□□□ 1.68
CHD1O14646 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
CHD1O14646 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC25.51■■□□□ 1.68
CHD1O14646 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC25.51■■□□□ 1.68
CHD1O14646 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CHD1O14646 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.68
CHD1O14646 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC25.51■■□□□ 1.68
CHD1O14646 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC25.51■■□□□ 1.68
CHD1O14646 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC25.51■■□□□ 1.68
CHD1O14646 MARK2P5-201ENST00000507649 634 ntBASIC25.51■■□□□ 1.68
CHD1O14646 IGLV3-15-201ENST00000518356 244 ntBASIC25.51■■□□□ 1.68
CHD1O14646 AC106820.3-201ENST00000561653 397 ntBASIC25.51■■□□□ 1.68
CHD1O14646 CENPX-208ENST00000584347 799 ntTSL 2 BASIC25.51■■□□□ 1.68
CHD1O14646 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC25.51■■□□□ 1.68
CHD1O14646 AL450472.2-201ENST00000603663 1156 ntBASIC25.51■■□□□ 1.68
CHD1O14646 AL136301.1-201ENST00000615830 422 ntBASIC25.51■■□□□ 1.68
CHD1O14646 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC25.51■■□□□ 1.67
CHD1O14646 AMT-233ENST00000636522 1620 ntTSL 2 BASIC25.51■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms