Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AL023284.2-201ENST00000405850 579 ntBASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CD99P1-205ENST00000527459 561 ntBASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SLC22A20-204ENST00000530038 1673 ntBASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MST1P2-201ENST00000457982 2291 ntBASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TUBB8P12-201ENST00000308911 1335 ntBASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TUBB7P-202ENST00000428444 1305 ntBASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TUBB8P7-204ENST00000567960 1332 ntBASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AL359881.3-201ENST00000602640 1721 ntBASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AC006058.3-201ENST00000606217 1069 ntBASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BOLA2-SMG1P6H3BVE0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms