Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PTPDC1A2A3K4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PTPDC1A2A3K4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 DUX4L27-201ENST00000554796 1261 ntBASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 AC026150.2-201ENST00000564693 1156 ntBASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 AC015911.4-201ENST00000588022 1070 ntBASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 AC005498.2-205ENST00000593218 784 ntBASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 CDC14C-201ENST00000428251 1719 ntBASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.08■□□□□ 0.64
PTPDC1A2A3K4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 TUBB3P1-201ENST00000405796 1332 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AC073439.1-201ENST00000624121 1774 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 FAM8A3P-201ENST00000427218 844 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AC069262.1-201ENST00000539058 672 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AL512356.2-201ENST00000546955 174 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SPCS2P1-201ENST00000561636 679 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AL138918.1-201ENST00000568306 659 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AP000842.3-202ENST00000569238 1080 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 AC092364.2-202ENST00000597012 1073 ntBASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTPDC1A2A3K4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms