Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 AC026691.1-201ENST00000602502 2017 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 PCDHA1-201ENST00000378133 2726 ntBASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TRGV1A0A0A0MS02 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC005622.1-201ENST00000636801 1703 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 KRT18P34-201ENST00000488218 1270 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 KRT19P2-202ENST00000557173 1012 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC027601.4-201ENST00000611259 610 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 BX640515.1-201ENST00000617215 977 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AL596087.1-201ENST00000400979 1969 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 REXO1L8P-201ENST00000604378 1897 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 AC008894.3-201ENST00000624324 3103 ntBASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TRGV1A0A0A0MS02 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRGV1A0A0A0MS02 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.83□□□□□ -0.51
TRGV1A0A0A0MS02 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.83□□□□□ -0.51
TRGV1A0A0A0MS02 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
TRGV1A0A0A0MS02 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TRGV1A0A0A0MS02 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms