Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
CCDC187A0A096LP49 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AL136982.4-201ENST00000437689 1740 ntBASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AC036164.1-201ENST00000570544 333 ntBASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 MIR6775-201ENST00000617557 69 ntBASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AL033527.4-201ENST00000641026 673 ntBASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC187A0A096LP49 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AC099398.1-201ENST00000567919 2776 ntBASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 SNX29P1-201ENST00000548357 1007 ntBASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 BTNL10-201ENST00000595971 695 ntBASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC187A0A096LP49 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms