Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 TSPY5P-201ENST00000426936 936 ntBASIC15.42■□□□□ 0.06
AP4S1Q9Y587 VENTXP7-201ENST00000475503 772 ntBASIC15.42■□□□□ 0.06
AP4S1Q9Y587 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 AL353135.1-201ENST00000606729 504 ntBASIC15.42■□□□□ 0.06
AP4S1Q9Y587 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 GRK6P1-201ENST00000400595 1711 ntBASIC15.42■□□□□ 0.06
AP4S1Q9Y587 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
AP4S1Q9Y587 AL359258.3-201ENST00000622910 2331 ntBASIC15.42■□□□□ 0.06
AP4S1Q9Y587 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 AC005622.1-201ENST00000636801 1703 ntBASIC15.41■□□□□ 0.06
AP4S1Q9Y587 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 AC117947.1-201ENST00000427448 529 ntBASIC15.41■□□□□ 0.06
AP4S1Q9Y587 AC091607.1-201ENST00000490318 1060 ntBASIC15.41■□□□□ 0.06
AP4S1Q9Y587 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AP4S1Q9Y587 MYO15B-237ENST00000642007 4893 ntBASIC15.41■□□□□ 0.06
AP4S1Q9Y587 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AP4S1Q9Y587 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms