Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.52■□□□□ 0.55
SYNPO2Q9UMS6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 KRT17P7-201ENST00000451704 1104 ntBASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 ELK1P1-201ENST00000485699 580 ntBASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 WASH4P-201ENST00000564273 1246 ntBASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SYNPO2Q9UMS6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 PRORSD1P-202ENST00000563365 2154 ntBASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 RN7SL399P-201ENST00000471648 279 ntBASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 AC036164.1-201ENST00000570544 333 ntBASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SYNPO2Q9UMS6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SYNPO2Q9UMS6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms