Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 CNN2P11-201ENST00000429351 262 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC022145.2-201ENST00000598203 171 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC006538.3-201ENST00000612495 578 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC139530.3-201ENST00000620344 690 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC055717.3-201ENST00000622967 595 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 U82695.1-201ENST00000635752 1889 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC092850.2-201ENST00000623821 2697 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 TSPY26P-202ENST00000565928 3884 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 AC067930.6-201ENST00000623257 4947 ntBASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.6□□□□□ -0.07
PARPBPQ9NWS1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 SPCS2P4-201ENST00000436160 681 ntBASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 AC073389.1-201ENST00000595595 795 ntBASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 UXT-AS1-201ENST00000590504 1525 ntBASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 AC073439.1-201ENST00000624121 1774 ntBASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PARPBPQ9NWS1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PARPBPQ9NWS1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PARPBPQ9NWS1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PARPBPQ9NWS1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms