Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 AC134407.2-201ENST00000625089 1978 ntBASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 LINC01115-203ENST00000606068 577 ntBASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
KIAA1549Q9HCM3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 SPDYE19P-201ENST00000338590 713 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 DGCR5-201ENST00000399539 862 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC098850.1-201ENST00000419919 790 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 GNAQP1-201ENST00000444815 1067 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AL139010.1-201ENST00000454878 894 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC004233.3-201ENST00000607794 1269 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AL662799.1-202ENST00000614205 422 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AL033527.5-202ENST00000641632 1098 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 LINC02447-202ENST00000501888 2146 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 COX5BP8-201ENST00000416911 349 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC007431.3-201ENST00000623221 587 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 AC004461.2-201ENST00000629517 803 ntBASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KIAA1549Q9HCM3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
KIAA1549Q9HCM3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
KIAA1549Q9HCM3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
KIAA1549Q9HCM3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms