Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 AC092933.1-201ENST00000393644 945 ntBASIC17.63■□□□□ 0.41
HIPK3Q9H422 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 CSF2RBP1-201ENST00000447905 391 ntBASIC17.63■□□□□ 0.41
HIPK3Q9H422 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 RNA5SP412-201ENST00000516234 123 ntBASIC17.63■□□□□ 0.41
HIPK3Q9H422 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 AC068587.10-201ENST00000641210 219 ntBASIC17.63■□□□□ 0.41
HIPK3Q9H422 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIPK3Q9H422 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
HIPK3Q9H422 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 HAUS4P1-201ENST00000406739 1145 ntBASIC17.62■□□□□ 0.41
HIPK3Q9H422 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 FAM21FP-201ENST00000426241 1131 ntBASIC17.62■□□□□ 0.41
HIPK3Q9H422 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 BCRP2-202ENST00000447763 634 ntBASIC17.62■□□□□ 0.41
HIPK3Q9H422 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 BCRP6-201ENST00000510112 632 ntBASIC17.62■□□□□ 0.41
HIPK3Q9H422 BCRP7-201ENST00000511549 544 ntBASIC17.62■□□□□ 0.41
HIPK3Q9H422 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIPK3Q9H422 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
HIPK3Q9H422 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 FO681548.1-201ENST00000455617 1132 ntBASIC17.61■□□□□ 0.41
HIPK3Q9H422 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIPK3Q9H422 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.61■□□□□ 0.41
HIPK3Q9H422 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.6■□□□□ 0.41
HIPK3Q9H422 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIPK3Q9H422 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms