Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAIPQ9BWF2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 SPTLC1P1-201ENST00000447199 261 ntBASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 CRB3P1-201ENST00000449338 276 ntBASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAIPQ9BWF2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 PIN1P1-201ENST00000412108 996 ntBASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 AC239800.4-201ENST00000603712 296 ntBASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAIPQ9BWF2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAIPQ9BWF2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAIPQ9BWF2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 SPDYE17-201ENST00000412399 783 ntBASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 MTND6P24-201ENST00000440466 518 ntBASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAIPQ9BWF2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms