Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
USB1Q9BQ65 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
USB1Q9BQ65 AC132872.4-202ENST00000622924 2756 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 TSEN15P1-201ENST00000423257 515 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 AL645939.2-201ENST00000427340 991 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 HLA-J-203ENST00000494367 1087 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 AL135744.1-201ENST00000565098 629 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 AC009118.3-201ENST00000622896 873 ntBASIC14.62□□□□□ -0.07
USB1Q9BQ65 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
USB1Q9BQ65 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.62□□□□□ -0.07
USB1Q9BQ65 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 AC005237.2-201ENST00000434368 219 ntBASIC14.61□□□□□ -0.07
USB1Q9BQ65 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 METTL21AP1-201ENST00000438852 635 ntBASIC14.61□□□□□ -0.07
USB1Q9BQ65 AL592309.1-201ENST00000443127 649 ntBASIC14.61□□□□□ -0.07
USB1Q9BQ65 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
USB1Q9BQ65 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms