Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL13Q99616 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CCL13Q99616 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCL13Q99616 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCL13Q99616 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.62□□□□□ -0.23
CCL13Q99616 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.62□□□□□ -0.23
CCL13Q99616 AC084121.4-201ENST00000641598 221 ntBASIC13.62□□□□□ -0.23
CCL13Q99616 AF228730.8-201ENST00000642140 221 ntBASIC13.62□□□□□ -0.23
CCL13Q99616 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
CCL13Q99616 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 AP3S2-216ENST00000617003 1561 ntBASIC13.62□□□□□ -0.23
CCL13Q99616 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.62□□□□□ -0.23
CCL13Q99616 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCL13Q99616 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCL13Q99616 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 ALG1L8P-201ENST00000533887 760 ntBASIC13.61□□□□□ -0.23
CCL13Q99616 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL13Q99616 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CCL13Q99616 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.61□□□□□ -0.23
CCL13Q99616 AC009093.7-201ENST00000623853 1223 ntBASIC13.61□□□□□ -0.23
CCL13Q99616 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
CCL13Q99616 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 PKD1P5-201ENST00000532415 10291 ntBASIC13.61□□□□□ -0.23
CCL13Q99616 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.61□□□□□ -0.23
CCL13Q99616 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCL13Q99616 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCL13Q99616 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms