Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRAMP1Q96RY5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRAMP1Q96RY5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRAMP1Q96RY5 RNF216P1-203ENST00000404404 2427 ntBASIC19.61■□□□□ 0.73
CRAMP1Q96RY5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRAMP1Q96RY5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CRAMP1Q96RY5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 BRWD1P1-201ENST00000401091 371 ntBASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 VDAC1P7-201ENST00000462417 847 ntBASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 AP001063.1-201ENST00000568332 529 ntBASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CRAMP1Q96RY5 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AP001094.4-201ENST00000579008 2176 ntBASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AC093433.1-201ENST00000458048 571 ntBASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 FTH1P14-201ENST00000482930 551 ntBASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AC084346.2-201ENST00000607097 949 ntBASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CRAMP1Q96RY5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CRAMP1Q96RY5 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CRAMP1Q96RY5 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CRAMP1Q96RY5 AC016694.1-201ENST00000434179 700 ntBASIC19.58■□□□□ 0.72
CRAMP1Q96RY5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.58■□□□□ 0.72
CRAMP1Q96RY5 AC108725.1-201ENST00000495472 409 ntBASIC19.58■□□□□ 0.72
CRAMP1Q96RY5 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms