Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 AL592309.1-201ENST00000443127 649 ntBASIC19.22■□□□□ 0.67
NEK1Q96PY6 AC069335.1-201ENST00000489972 472 ntBASIC19.22■□□□□ 0.67
NEK1Q96PY6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 AC024267.1-201ENST00000582320 895 ntBASIC19.22■□□□□ 0.67
NEK1Q96PY6 MIR4469-201ENST00000583919 79 ntBASIC19.22■□□□□ 0.67
NEK1Q96PY6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 AC132872.4-202ENST00000622924 2756 ntBASIC19.22■□□□□ 0.67
NEK1Q96PY6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NEK1Q96PY6 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NEK1Q96PY6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 RPSAP43-201ENST00000402237 625 ntBASIC19.21■□□□□ 0.67
NEK1Q96PY6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AC010327.4-202ENST00000591484 748 ntBASIC19.21■□□□□ 0.67
NEK1Q96PY6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AL691403.2-201ENST00000618460 490 ntBASIC19.21■□□□□ 0.67
NEK1Q96PY6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 AC084121.4-201ENST00000641598 221 ntBASIC19.21■□□□□ 0.67
NEK1Q96PY6 AF228730.8-201ENST00000642140 221 ntBASIC19.21■□□□□ 0.67
NEK1Q96PY6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NEK1Q96PY6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.21■□□□□ 0.67
NEK1Q96PY6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 AC022145.2-201ENST00000598203 171 ntBASIC19.2■□□□□ 0.66
NEK1Q96PY6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NEK1Q96PY6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.2■□□□□ 0.66
NEK1Q96PY6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.19■□□□□ 0.66
NEK1Q96PY6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms