Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 AZGP1P1-201ENST00000411909 902 ntBASIC18.82■□□□□ 0.6
CCDC17Q96LX7 COX5BP8-201ENST00000416911 349 ntBASIC18.82■□□□□ 0.6
CCDC17Q96LX7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 CHCHD2P3-201ENST00000603038 451 ntBASIC18.82■□□□□ 0.6
CCDC17Q96LX7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 CU639417.3-201ENST00000624240 1404 ntBASIC18.82■□□□□ 0.6
CCDC17Q96LX7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 AC026471.1-201ENST00000564629 3026 ntBASIC18.82■□□□□ 0.6
CCDC17Q96LX7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC17Q96LX7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AL589987.1-201ENST00000453380 819 ntBASIC18.81■□□□□ 0.6
CCDC17Q96LX7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 MEIS3P1-201ENST00000495167 958 ntBASIC18.81■□□□□ 0.6
CCDC17Q96LX7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AC023310.3-201ENST00000557027 670 ntBASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AC100756.1-201ENST00000562736 682 ntBASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AC138749.3-201ENST00000567691 622 ntBASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AC116165.1-201ENST00000611806 668 ntBASIC18.81■□□□□ 0.6
CCDC17Q96LX7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC17Q96LX7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 RRP7BP-205ENST00000566851 833 ntBASIC18.8■□□□□ 0.6
CCDC17Q96LX7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC17Q96LX7 AC006449.6-201ENST00000612330 2296 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms