Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CHAMP1Q96JM3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 HCG4-201ENST00000418983 998 ntBASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 AC108073.2-201ENST00000464002 357 ntBASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 IFNL4P1-201ENST00000607083 540 ntBASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.87■□□□□ 0.61
CHAMP1Q96JM3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 AL109954.1-202ENST00000564051 2148 ntBASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 SCARNA2-201ENST00000458748 420 ntBASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 RNPS1P1-201ENST00000507437 918 ntBASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 AP001350.2-201ENST00000625104 1094 ntBASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.86■□□□□ 0.61
CHAMP1Q96JM3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 RNU1-129P-201ENST00000384064 167 ntBASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 U1.21-201ENST00000580816 167 ntBASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 AL356488.2-201ENST00000602755 427 ntBASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHAMP1Q96JM3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms