Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AC116353.5-201ENST00000638148 1699 ntBASIC17.22■□□□□ 0.35
TIFAQ96CG3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.22■□□□□ 0.35
TIFAQ96CG3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TIFAQ96CG3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TIFAQ96CG3 AC134312.5-201ENST00000568031 1313 ntBASIC17.21■□□□□ 0.35
TIFAQ96CG3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 AL662890.1-201ENST00000396818 632 ntBASIC17.21■□□□□ 0.35
TIFAQ96CG3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 AC105129.2-201ENST00000559536 390 ntBASIC17.21■□□□□ 0.35
TIFAQ96CG3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 U62317.3-201ENST00000608319 855 ntBASIC17.21■□□□□ 0.35
TIFAQ96CG3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.21■□□□□ 0.35
TIFAQ96CG3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 INTS4P2-202ENST00000614726 2019 ntBASIC17.21■□□□□ 0.35
TIFAQ96CG3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TIFAQ96CG3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
TIFAQ96CG3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.21■□□□□ 0.34
TIFAQ96CG3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 CYP4F24P-201ENST00000586049 1580 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 AC012441.1-201ENST00000446669 685 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 UPF3AP2-201ENST00000457924 1132 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 RPL13AP25-201ENST00000484130 612 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 AC106760.1-201ENST00000508690 800 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 AC023310.1-201ENST00000554836 735 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 MIR4722-201ENST00000578292 60 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 AL008638.5-201ENST00000623814 1298 ntBASIC17.2■□□□□ 0.34
TIFAQ96CG3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TIFAQ96CG3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.2■□□□□ 0.34
TIFAQ96CG3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.19■□□□□ 0.34
TIFAQ96CG3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TIFAQ96CG3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms