Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.13■□□□□ 0.49
ATP6V0A1Q93050 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 NME2P1-201ENST00000426182 414 ntBASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 AC245100.5-201ENST00000452108 331 ntBASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 AL139010.1-201ENST00000454878 894 ntBASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 AC004840.1-201ENST00000636359 365 ntBASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ATP6V0A1Q93050 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 AC135586.1-201ENST00000539323 574 ntBASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 AC007541.1-201ENST00000570282 1469 ntBASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATP6V0A1Q93050 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 AL132655.2-201ENST00000596276 594 ntBASIC18.1■□□□□ 0.49
ATP6V0A1Q93050 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms