Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP3S1Q92572 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S1Q92572 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S1Q92572 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S1Q92572 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S1Q92572 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 AC232323.1-201ENST00000540724 2099 ntBASIC14.37□□□□□ -0.11
AP3S1Q92572 REXO1L5P-201ENST00000622260 2098 ntBASIC14.37□□□□□ -0.11
AP3S1Q92572 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP3S1Q92572 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.37□□□□□ -0.11
AP3S1Q92572 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.37□□□□□ -0.11
AP3S1Q92572 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.37□□□□□ -0.11
AP3S1Q92572 MPDU1-223ENST00000582151 728 ntBASIC14.37□□□□□ -0.11
AP3S1Q92572 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP3S1Q92572 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP3S1Q92572 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
AP3S1Q92572 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S1Q92572 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 AC013726.1-201ENST00000563747 2285 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
AP3S1Q92572 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
AP3S1Q92572 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
AP3S1Q92572 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AP3S1Q92572 AC007191.1-201ENST00000623179 2995 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.36□□□□□ -0.11
AP3S1Q92572 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 AC092597.1-201ENST00000487352 616 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 AC090192.1-201ENST00000517740 490 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 AC011840.4-201ENST00000578471 627 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 MIR4492-201ENST00000581627 80 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.36□□□□□ -0.11
AP3S1Q92572 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.36□□□□□ -0.11
AP3S1Q92572 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.36□□□□□ -0.11
AP3S1Q92572 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S1Q92572 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP3S1Q92572 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms