Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAPGEF4Q8WZA2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 AC074338.1-201ENST00000416825 156 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 TARDBPP1-201ENST00000442013 1203 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 BNIP3P42-201ENST00000454982 569 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 SLC25A47P1-201ENST00000531577 414 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 BNIP3P29-201ENST00000598302 571 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 AC011447.5-201ENST00000616168 564 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 AC009053.2-201ENST00000563701 2365 ntBASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.09■□□□□ 0.97
RAPGEF4Q8WZA2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 FAM86LP-201ENST00000478302 853 ntBASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 MIR5189-201ENST00000577370 114 ntBASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RAPGEF4Q8WZA2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAPGEF4Q8WZA2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAPGEF4Q8WZA2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms