Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LMO3Q8TAP4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CYP4F24P-201ENST00000586049 1580 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC004987.2-201ENST00000395959 1148 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC211486.1-202ENST00000416371 468 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 KRT18P32-201ENST00000424695 1287 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 SPDYE14P-201ENST00000442619 822 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 EEF1DP4-201ENST00000446006 880 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AP006288.1-201ENST00000446065 395 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC211476.1-201ENST00000503899 468 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC009093.7-201ENST00000623853 1223 ntBASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LMO3Q8TAP4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 AC004835.2-201ENST00000603762 682 ntBASIC17.31■□□□□ 0.36
LMO3Q8TAP4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LMO3Q8TAP4 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.3■□□□□ 0.36
LMO3Q8TAP4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms