Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 KRT8P13-201ENST00000463294 1010 ntBASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 AC133539.2-201ENST00000604757 467 ntBASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CFAP43Q8NDM7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 AC244669.2-201ENST00000612320 853 ntBASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
CFAP43Q8NDM7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC136604.1-201ENST00000418535 575 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 RPL13P2-201ENST00000440687 659 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC106760.1-201ENST00000508690 800 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 HNRNPA1P13-201ENST00000510646 963 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AP001889.1-201ENST00000525414 633 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 RHOXF1P1-202ENST00000635473 501 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 ZBTB45P2-201ENST00000452245 1531 ntBASIC24.92■■□□□ 1.58
CFAP43Q8NDM7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 AC134407.2-201ENST00000625089 1978 ntBASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 BCRP2-202ENST00000447763 634 ntBASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 BCRP6-201ENST00000510112 632 ntBASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 BCRP7-201ENST00000511549 544 ntBASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 FO393414.2-201ENST00000405153 598 ntBASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 FXNP2-201ENST00000411625 547 ntBASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CFAP43Q8NDM7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CFAP43Q8NDM7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms