Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC018735.1-201ENST00000437208 1502 ntBASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 RPL13P2-201ENST00000440687 659 ntBASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 AC093724.1-201ENST00000448659 1027 ntBASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 AC106760.1-201ENST00000508690 800 ntBASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC168Q8NDH2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 INTS4P2-202ENST00000614726 2019 ntBASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 POM121L10P-201ENST00000436994 1285 ntBASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 Z97205.2-201ENST00000564697 1639 ntBASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 AC093525.9-201ENST00000624961 1746 ntBASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 AC091812.3-201ENST00000621362 345 ntBASIC13.44□□□□□ -0.26
CCDC168Q8NDH2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 AC015818.8-201ENST00000587907 1519 ntBASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 AC006001.1-201ENST00000325130 474 ntBASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 TOMM22P5-201ENST00000416399 439 ntBASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 AC134698.3-201ENST00000523880 214 ntBASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 AC092068.3-201ENST00000587894 2016 ntBASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC168Q8NDH2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms