Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AL591424.1-201ENST00000442569 1213 ntBASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AC074386.1-202ENST00000463561 864 ntBASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AC018845.2-201ENST00000568326 409 ntBASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AC016027.1-202ENST00000607927 1699 ntBASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LSMEM1Q8N8F7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 WASH6P-202ENST00000359512 1437 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AL590627.1-203ENST00000421194 1026 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC007967.2-201ENST00000432613 625 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC068137.2-201ENST00000605408 478 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AL365330.1-201ENST00000607459 531 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AC073439.1-201ENST00000624121 1774 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 AL137784.3-201ENST00000623858 2288 ntBASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LSMEM1Q8N8F7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms