Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ZNF890P-202ENST00000530367 1156 ntBASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.27■□□□□ 0.04
ARHGEF39Q8N4T4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.27■□□□□ 0.03
ARHGEF39Q8N4T4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 BASP1P1-201ENST00000430708 665 ntBASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AL512361.1-201ENST00000554200 418 ntBASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 BNIP3P1-202ENST00000550043 1585 ntBASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ARHGEF39Q8N4T4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 UGT1A2P-201ENST00000454886 866 ntBASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 IGHV3-42-201ENST00000520410 361 ntBASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 AC243562.2-201ENST00000561247 970 ntBASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 AC010336.2-201ENST00000564226 506 ntBASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 AC009407.1-201ENST00000568958 598 ntBASIC15.25■□□□□ 0.03
ARHGEF39Q8N4T4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms