Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 KRT18P32-201ENST00000424695 1287 ntBASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 DUX4L27-201ENST00000554796 1261 ntBASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 AL390955.2-201ENST00000603032 514 ntBASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC144CPQ8IYA2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 CYP2T1P-202ENST00000641596 2535 ntBASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 SPCS2P4-201ENST00000436160 681 ntBASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC144CPQ8IYA2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 AL035633.1-201ENST00000406139 838 ntBASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 GPS2P2-201ENST00000430745 888 ntBASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 PRYP6-201ENST00000514804 343 ntBASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC144CPQ8IYA2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms