Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERC6Q8IVU3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 CTBP2P5-201ENST00000454986 1264 ntBASIC17.5■□□□□ 0.39
HERC6Q8IVU3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 AC020765.3-201ENST00000613051 740 ntBASIC17.5■□□□□ 0.39
HERC6Q8IVU3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.5■□□□□ 0.39
HERC6Q8IVU3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
HERC6Q8IVU3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AC093525.8-201ENST00000624099 1342 ntBASIC17.49■□□□□ 0.39
HERC6Q8IVU3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 PDIA3P1-201ENST00000471856 1510 ntBASIC17.49■□□□□ 0.39
HERC6Q8IVU3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 AD000864.1-201ENST00000624076 2295 ntBASIC17.49■□□□□ 0.39
HERC6Q8IVU3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HERC6Q8IVU3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC092933.1-201ENST00000393644 945 ntBASIC17.48■□□□□ 0.39
HERC6Q8IVU3 BCYRN1-201ENST00000418539 200 ntBASIC17.48■□□□□ 0.39
HERC6Q8IVU3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HERC6Q8IVU3 KLF2P4-201ENST00000451959 1225 ntBASIC17.48■□□□□ 0.39
HERC6Q8IVU3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms