Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.06■□□□□ 0
VRK2Q86Y07 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.06■□□□□ 0
VRK2Q86Y07 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.06■□□□□ 0
VRK2Q86Y07 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.06■□□□□ 0
VRK2Q86Y07 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.06■□□□□ 0
VRK2Q86Y07 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK2Q86Y07 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
VRK2Q86Y07 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
VRK2Q86Y07 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
VRK2Q86Y07 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
VRK2Q86Y07 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
VRK2Q86Y07 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VRK2Q86Y07 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.05■□□□□ 0
VRK2Q86Y07 LINC00554-201ENST00000564841 3011 ntBASIC15.05■□□□□ 0
VRK2Q86Y07 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.05■□□□□ -0
VRK2Q86Y07 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
VRK2Q86Y07 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.05■□□□□ -0
VRK2Q86Y07 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.05■□□□□ -0
VRK2Q86Y07 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.05■□□□□ -0
VRK2Q86Y07 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.05■□□□□ -0
VRK2Q86Y07 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.05■□□□□ -0
VRK2Q86Y07 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.05■□□□□ -0
VRK2Q86Y07 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.05■□□□□ -0
VRK2Q86Y07 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.05■□□□□ -0
VRK2Q86Y07 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.05■□□□□ -0
VRK2Q86Y07 AC068137.2-201ENST00000605408 478 ntBASIC15.05■□□□□ -0
VRK2Q86Y07 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.05■□□□□ -0
VRK2Q86Y07 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.05■□□□□ -0
VRK2Q86Y07 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.05■□□□□ -0
VRK2Q86Y07 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.05■□□□□ -0
VRK2Q86Y07 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.05■□□□□ -0
VRK2Q86Y07 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VRK2Q86Y07 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK2Q86Y07 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.05■□□□□ -0
VRK2Q86Y07 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.04■□□□□ -0
VRK2Q86Y07 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.04■□□□□ -0
VRK2Q86Y07 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 AC008677.1-201ENST00000519230 1561 ntBASIC15.04■□□□□ -0
VRK2Q86Y07 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 ZNF259P1-201ENST00000407656 1365 ntBASIC15.04■□□□□ -0
VRK2Q86Y07 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.04■□□□□ -0
VRK2Q86Y07 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
VRK2Q86Y07 AC074386.1-202ENST00000463561 864 ntBASIC15.04■□□□□ -0
VRK2Q86Y07 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.04■□□□□ -0
VRK2Q86Y07 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.04■□□□□ -0
VRK2Q86Y07 PDPK2P-202ENST00000562415 1191 ntBASIC15.04■□□□□ -0
VRK2Q86Y07 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.04■□□□□ -0
VRK2Q86Y07 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 AC092865.6-201ENST00000642101 219 ntBASIC15.04■□□□□ -0
VRK2Q86Y07 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.04■□□□□ -0
VRK2Q86Y07 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.04■□□□□ -0
VRK2Q86Y07 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
VRK2Q86Y07 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms