Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AC007431.3-201ENST00000623221 587 ntBASIC20.37■□□□□ 0.85
COPS6Q7L5N1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 Z97205.2-201ENST00000564697 1639 ntBASIC20.37■□□□□ 0.85
COPS6Q7L5N1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.37■□□□□ 0.85
COPS6Q7L5N1 NKILA-202ENST00000614771 2598 ntBASIC20.37■□□□□ 0.85
COPS6Q7L5N1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 AC098850.1-201ENST00000419919 790 ntBASIC20.36■□□□□ 0.85
COPS6Q7L5N1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 LINC01115-203ENST00000606068 577 ntBASIC20.36■□□□□ 0.85
COPS6Q7L5N1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COPS6Q7L5N1 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AC098614.1-201ENST00000368528 745 ntBASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AC244107.1-201ENST00000442033 332 ntBASIC20.35■□□□□ 0.85
COPS6Q7L5N1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
COPS6Q7L5N1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 MEP1AP4-201ENST00000423244 1087 ntBASIC20.34■□□□□ 0.85
COPS6Q7L5N1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 MEIS3P1-201ENST00000495167 958 ntBASIC20.34■□□□□ 0.85
COPS6Q7L5N1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 TIMM17BP1-201ENST00000545713 516 ntBASIC20.34■□□□□ 0.85
COPS6Q7L5N1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20.34■□□□□ 0.85
COPS6Q7L5N1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms