Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 NFIC-211ENST00000641145 8399 ntBASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 OR2I1P-209ENST00000641730 5365 ntBASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 WASH6P-202ENST00000359512 1437 ntBASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LINC00299Q6ZSB3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 AC243591.1-201ENST00000452967 1364 ntBASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 AL356585.2-201ENST00000625078 2396 ntBASIC14.22□□□□□ -0.13
LINC00299Q6ZSB3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00299Q6ZSB3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms