Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
CCDC141Q6ZP82 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 AC020907.1-201ENST00000616460 1350 ntBASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC141Q6ZP82 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 CYP2AB1P-202ENST00000454440 1456 ntBASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC141Q6ZP82 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 AC134312.5-201ENST00000568031 1313 ntBASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 TPO-206ENST00000382269 1155 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 OLR1-203ENST00000432556 950 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 DUX4L45-201ENST00000566406 1057 ntBASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 RN7SL219P-201ENST00000582872 296 ntBASIC23.78■■□□□ 1.4
CCDC141Q6ZP82 RHOXF1P1-202ENST00000635473 501 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms