Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MIR648-201ENST00000385046 94 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC105339.3-201ENST00000560043 636 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC005593.1-201ENST00000624894 515 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AL592424.1-201ENST00000563624 1536 ntBASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMARCD3Q6STE5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 CLEC4GP1-201ENST00000596555 870 ntBASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AP005117.1-202ENST00000581724 1908 ntBASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 AC112504.1-201ENST00000623415 1841 ntBASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMARCD3Q6STE5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.88□□□□□ -0.03
SMARCD3Q6STE5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms