Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASC4Q6P4E1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CASC4Q6P4E1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CASC4Q6P4E1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CASC4Q6P4E1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.64■□□□□ 0.26
CASC4Q6P4E1 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 CRYGEP-201ENST00000412192 528 ntBASIC16.64■□□□□ 0.25
CASC4Q6P4E1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 VN2R19P-201ENST00000442399 1052 ntBASIC16.64■□□□□ 0.25
CASC4Q6P4E1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 AC116407.3-201ENST00000623905 1129 ntBASIC16.64■□□□□ 0.25
CASC4Q6P4E1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CASC4Q6P4E1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 PMS2P4-201ENST00000412466 1052 ntBASIC16.63■□□□□ 0.25
CASC4Q6P4E1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 UNC93B6-202ENST00000528242 690 ntBASIC16.63■□□□□ 0.25
CASC4Q6P4E1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 LINC02447-202ENST00000501888 2146 ntBASIC16.63■□□□□ 0.25
CASC4Q6P4E1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.63■□□□□ 0.25
CASC4Q6P4E1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms