Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 MIR648-201ENST00000385046 94 ntBASIC12.33□□□□□ -0.44
MRPL54Q6P161 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC026471.5-201ENST00000615068 467 ntBASIC12.33□□□□□ -0.44
MRPL54Q6P161 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 AC113410.3-201ENST00000623366 203 ntBASIC12.33□□□□□ -0.44
MRPL54Q6P161 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.33□□□□□ -0.44
MRPL54Q6P161 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
MRPL54Q6P161 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 PCGF3-213ENST00000620529 1899 ntBASIC12.32□□□□□ -0.44
MRPL54Q6P161 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 KLF4P1-201ENST00000412782 1185 ntBASIC12.32□□□□□ -0.44
MRPL54Q6P161 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
MRPL54Q6P161 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
MRPL54Q6P161 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms