Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 CICP20-201ENST00000443330 2801 ntBASIC15.74■□□□□ 0.11
RNF220Q5VTB9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF220Q5VTB9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 AL645728.1-201ENST00000366221 2101 ntBASIC15.73■□□□□ 0.11
RNF220Q5VTB9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 DUX4L17-201ENST00000557360 1267 ntBASIC15.73■□□□□ 0.11
RNF220Q5VTB9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 AL022326.1-202ENST00000641533 845 ntBASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF220Q5VTB9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 NCF1C-201ENST00000438382 1427 ntBASIC15.72■□□□□ 0.11
RNF220Q5VTB9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 HCG4P8-203ENST00000443049 980 ntBASIC15.72■□□□□ 0.11
RNF220Q5VTB9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 MIR3652-201ENST00000579335 131 ntBASIC15.72■□□□□ 0.11
RNF220Q5VTB9 AL353135.1-201ENST00000606729 504 ntBASIC15.72■□□□□ 0.11
RNF220Q5VTB9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF220Q5VTB9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms