Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.18□□□□□ -0.14
ATPAF1Q5TC12 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 VN2R19P-201ENST00000442399 1052 ntBASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 OR7E47P-204ENST00000575924 449 ntBASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 TNRC18P2-201ENST00000417666 2714 ntBASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATPAF1Q5TC12 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 AP005117.1-202ENST00000581724 1908 ntBASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 CRYGEP-201ENST00000412192 528 ntBASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.16□□□□□ -0.14
ATPAF1Q5TC12 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms