Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 AC027612.4-201ENST00000605371 583 ntBASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN20Q4JDL3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 MIR1233-2-201ENST00000408138 82 ntBASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 MIR1233-1-201ENST00000408722 82 ntBASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 AC023141.5-201ENST00000458585 616 ntBASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 AC009093.7-201ENST00000623853 1223 ntBASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN20Q4JDL3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 CNN2P11-201ENST00000429351 262 ntBASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 SPDYE14P-201ENST00000442619 822 ntBASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 DNAJB3-202ENST00000449667 1266 ntBASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 ALG1L8P-201ENST00000533887 760 ntBASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN20Q4JDL3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 AL596442.2-201ENST00000610240 980 ntBASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms