Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
TRIM71Q2Q1W2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 BOLA2P3-201ENST00000404566 256 ntBASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 AC036164.1-201ENST00000570544 333 ntBASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM71Q2Q1W2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 AC104989.1-201ENST00000519711 778 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 SLC25A47P1-201ENST00000531577 414 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 AC243562.2-201ENST00000561247 970 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 MIR5189-201ENST00000577370 114 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 BRI3BPP1-201ENST00000594224 787 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 AC233724.13-201ENST00000598383 410 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 HTR7P1-202ENST00000624664 4411 ntBASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM71Q2Q1W2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AC018665.1-201ENST00000622927 1362 ntBASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 AC011270.2-201ENST00000624293 2550 ntBASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 BNIP3P1-202ENST00000550043 1585 ntBASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM71Q2Q1W2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms