Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TFF3Q07654 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.25□□□□□ -0.13
TFF3Q07654 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.25□□□□□ -0.13
TFF3Q07654 RN7SL837P-201ENST00000463010 287 ntBASIC14.25□□□□□ -0.13
TFF3Q07654 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TFF3Q07654 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
TFF3Q07654 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.25□□□□□ -0.13
TFF3Q07654 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.25□□□□□ -0.13
TFF3Q07654 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.25□□□□□ -0.13
TFF3Q07654 AC026979.3-201ENST00000607315 403 ntBASIC14.25□□□□□ -0.13
TFF3Q07654 AC004461.2-201ENST00000629517 803 ntBASIC14.25□□□□□ -0.13
TFF3Q07654 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.25□□□□□ -0.13
TFF3Q07654 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TFF3Q07654 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.25□□□□□ -0.13
TFF3Q07654 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TFF3Q07654 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.25□□□□□ -0.13
TFF3Q07654 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TFF3Q07654 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TFF3Q07654 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TFF3Q07654 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TFF3Q07654 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 PCDHB17P-201ENST00000539533 2393 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TFF3Q07654 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TFF3Q07654 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.24□□□□□ -0.13
TFF3Q07654 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 MEP1AP4-201ENST00000423244 1087 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.24□□□□□ -0.13
TFF3Q07654 TPRX2P-201ENST00000535362 881 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.24□□□□□ -0.13
TFF3Q07654 AC023310.3-201ENST00000557027 670 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 RAB43P1-201ENST00000561790 589 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 AC100756.1-201ENST00000562736 682 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 AC138749.3-201ENST00000567691 622 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.24□□□□□ -0.13
TFF3Q07654 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 AC116165.1-201ENST00000611806 668 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.24□□□□□ -0.13
TFF3Q07654 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TFF3Q07654 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 AC008894.3-201ENST00000624324 3103 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.24□□□□□ -0.13
TFF3Q07654 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
TFF3Q07654 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TFF3Q07654 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TFF3Q07654 AC092068.3-201ENST00000587894 2016 ntBASIC14.24□□□□□ -0.13
TFF3Q07654 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms