Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 MIR600HG-201ENST00000449175 5984 ntBASIC14.4□□□□□ -0.1
NKX6-1P78426 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
NKX6-1P78426 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NKX6-1P78426 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX6-1P78426 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NKX6-1P78426 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
NKX6-1P78426 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
NKX6-1P78426 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NKX6-1P78426 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.39□□□□□ -0.11
NKX6-1P78426 NORAD-201ENST00000565493 5339 ntBASIC14.39□□□□□ -0.11
NKX6-1P78426 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 MIR661-201ENST00000384842 89 ntBASIC14.39□□□□□ -0.11
NKX6-1P78426 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 AL358472.5-202ENST00000641448 1267 ntBASIC14.39□□□□□ -0.11
NKX6-1P78426 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.39□□□□□ -0.11
NKX6-1P78426 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NKX6-1P78426 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NKX6-1P78426 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-1P78426 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 LINC00554-201ENST00000564841 3011 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 SNX33P1-201ENST00000592116 1762 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 UXT-AS1-201ENST00000590504 1525 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-1P78426 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-1P78426 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 AL008721.1-201ENST00000609964 604 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.38□□□□□ -0.11
NKX6-1P78426 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.38□□□□□ -0.11
NKX6-1P78426 AL139011.1-202ENST00000642063 584 ntBASIC14.38□□□□□ -0.11
NKX6-1P78426 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NKX6-1P78426 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NKX6-1P78426 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms