Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE1AP54750 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDE1AP54750 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PDE1AP54750 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.8■□□□□ 0.76
PDE1AP54750 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDE1AP54750 AP001282.1-201ENST00000531301 1499 ntBASIC19.79■□□□□ 0.76
PDE1AP54750 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE1AP54750 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PDE1AP54750 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PDE1AP54750 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.79■□□□□ 0.76
PDE1AP54750 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.79■□□□□ 0.76
PDE1AP54750 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 AL691432.1-201ENST00000596308 1422 ntBASIC19.79■□□□□ 0.76
PDE1AP54750 AC011477.6-201ENST00000604980 1927 ntBASIC19.79■□□□□ 0.76
PDE1AP54750 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE1AP54750 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.79■□□□□ 0.76
PDE1AP54750 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.79■□□□□ 0.76
PDE1AP54750 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.79■□□□□ 0.76
PDE1AP54750 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.79■□□□□ 0.76
PDE1AP54750 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.79■□□□□ 0.76
PDE1AP54750 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE1AP54750 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.79■□□□□ 0.76
PDE1AP54750 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 PRAL-201ENST00000624952 3286 ntBASIC19.79■□□□□ 0.76
PDE1AP54750 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PDE1AP54750 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PDE1AP54750 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDE1AP54750 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.78■□□□□ 0.76
PDE1AP54750 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.78■□□□□ 0.76
PDE1AP54750 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 AL627223.1-201ENST00000416693 442 ntBASIC19.78■□□□□ 0.76
PDE1AP54750 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.78■□□□□ 0.76
PDE1AP54750 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
PDE1AP54750 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.78■□□□□ 0.76
PDE1AP54750 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PDE1AP54750 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.78■□□□□ 0.76
PDE1AP54750 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.78■□□□□ 0.76
PDE1AP54750 AL162727.3-201ENST00000635661 2787 ntBASIC19.78■□□□□ 0.76
PDE1AP54750 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 AL136982.4-201ENST00000437689 1740 ntBASIC19.77■□□□□ 0.76
PDE1AP54750 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
PDE1AP54750 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.77■□□□□ 0.76
PDE1AP54750 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 GPS2P2-201ENST00000430745 888 ntBASIC19.77■□□□□ 0.76
PDE1AP54750 AC005237.2-201ENST00000434368 219 ntBASIC19.77■□□□□ 0.76
PDE1AP54750 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.77■□□□□ 0.76
PDE1AP54750 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PDE1AP54750 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms