Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAD23BP54727 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAD23BP54727 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RAD23BP54727 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.4■□□□□ 0.38
RAD23BP54727 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.4■□□□□ 0.38
RAD23BP54727 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.4■□□□□ 0.38
RAD23BP54727 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.4■□□□□ 0.38
RAD23BP54727 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.4■□□□□ 0.38
RAD23BP54727 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.4■□□□□ 0.38
RAD23BP54727 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.4■□□□□ 0.38
RAD23BP54727 SNHG9-202ENST00000564014 471 ntBASIC17.4■□□□□ 0.38
RAD23BP54727 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.4■□□□□ 0.38
RAD23BP54727 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.4■□□□□ 0.38
RAD23BP54727 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.4■□□□□ 0.38
RAD23BP54727 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RAD23BP54727 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
RAD23BP54727 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAD23BP54727 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.4■□□□□ 0.38
RAD23BP54727 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAD23BP54727 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RAD23BP54727 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RAD23BP54727 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.39■□□□□ 0.38
RAD23BP54727 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
RAD23BP54727 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RAD23BP54727 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.39■□□□□ 0.38
RAD23BP54727 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAD23BP54727 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.39■□□□□ 0.37
RAD23BP54727 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.39■□□□□ 0.37
RAD23BP54727 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RAD23BP54727 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RAD23BP54727 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAD23BP54727 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 GPS2P2-201ENST00000430745 888 ntBASIC17.39■□□□□ 0.37
RAD23BP54727 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 AP001160.2-201ENST00000596071 487 ntBASIC17.39■□□□□ 0.37
RAD23BP54727 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.39■□□□□ 0.37
RAD23BP54727 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.39■□□□□ 0.37
RAD23BP54727 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RAD23BP54727 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.39■□□□□ 0.37
RAD23BP54727 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAD23BP54727 AL596087.1-201ENST00000400979 1969 ntBASIC17.39■□□□□ 0.37
RAD23BP54727 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAD23BP54727 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.38■□□□□ 0.37
RAD23BP54727 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAD23BP54727 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RAD23BP54727 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.38■□□□□ 0.37
RAD23BP54727 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 KRT18P32-201ENST00000424695 1287 ntBASIC17.38■□□□□ 0.37
RAD23BP54727 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAD23BP54727 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms