Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PMS1P54277 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PMS1P54277 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.87■□□□□ 0.45
PMS1P54277 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 AC092850.2-201ENST00000623821 2697 ntBASIC17.86■□□□□ 0.45
PMS1P54277 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 AC134407.2-201ENST00000625089 1978 ntBASIC17.86■□□□□ 0.45
PMS1P54277 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 AC126177.1-201ENST00000547829 2218 ntBASIC17.86■□□□□ 0.45
PMS1P54277 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PMS1P54277 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.86■□□□□ 0.45
PMS1P54277 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.86■□□□□ 0.45
PMS1P54277 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
PMS1P54277 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.86■□□□□ 0.45
PMS1P54277 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.86■□□□□ 0.45
PMS1P54277 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 AC073389.1-201ENST00000595595 795 ntBASIC17.86■□□□□ 0.45
PMS1P54277 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PMS1P54277 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
PMS1P54277 AC092902.6-201ENST00000641783 218 ntBASIC17.86■□□□□ 0.45
PMS1P54277 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.86■□□□□ 0.45
PMS1P54277 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.86■□□□□ 0.45
PMS1P54277 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 AC104640.1-201ENST00000562617 2109 ntBASIC17.86■□□□□ 0.45
PMS1P54277 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.86■□□□□ 0.45
PMS1P54277 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PMS1P54277 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.85■□□□□ 0.45
PMS1P54277 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.85■□□□□ 0.45
PMS1P54277 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.85■□□□□ 0.45
PMS1P54277 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 CICP13-201ENST00000422015 2789 ntBASIC17.85■□□□□ 0.45
PMS1P54277 ADH5P3-201ENST00000433842 1137 ntBASIC17.85■□□□□ 0.45
PMS1P54277 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.85■□□□□ 0.45
PMS1P54277 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 AC112191.1-201ENST00000523689 701 ntBASIC17.85■□□□□ 0.45
PMS1P54277 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PMS1P54277 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.85■□□□□ 0.45
PMS1P54277 RARRES2P8-201ENST00000566335 367 ntBASIC17.85■□□□□ 0.45
PMS1P54277 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.85■□□□□ 0.45
PMS1P54277 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.85■□□□□ 0.45
PMS1P54277 AL365330.1-201ENST00000607459 531 ntBASIC17.85■□□□□ 0.45
PMS1P54277 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.85■□□□□ 0.45
PMS1P54277 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.85■□□□□ 0.45
PMS1P54277 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PMS1P54277 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PMS1P54277 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PMS1P54277 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.84■□□□□ 0.45
PMS1P54277 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PMS1P54277 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PMS1P54277 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PMS1P54277 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
PMS1P54277 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms