Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.96■□□□□ 0.47
LBX1P52954 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.96■□□□□ 0.47
LBX1P52954 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.96■□□□□ 0.47
LBX1P52954 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.96■□□□□ 0.47
LBX1P52954 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LBX1P52954 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LBX1P52954 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LBX1P52954 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LBX1P52954 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LBX1P52954 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LBX1P52954 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.96■□□□□ 0.47
LBX1P52954 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.96■□□□□ 0.47
LBX1P52954 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LBX1P52954 AL355312.1-201ENST00000407115 2176 ntBASIC17.96■□□□□ 0.46
LBX1P52954 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LBX1P52954 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.95■□□□□ 0.46
LBX1P52954 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 AC004987.2-201ENST00000395959 1148 ntBASIC17.95■□□□□ 0.46
LBX1P52954 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LBX1P52954 AC012362.1-201ENST00000434906 739 ntBASIC17.95■□□□□ 0.46
LBX1P52954 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.95■□□□□ 0.46
LBX1P52954 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.95■□□□□ 0.46
LBX1P52954 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.95■□□□□ 0.46
LBX1P52954 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.95■□□□□ 0.46
LBX1P52954 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.95■□□□□ 0.46
LBX1P52954 MIR4649-201ENST00000582839 64 ntBASIC17.95■□□□□ 0.46
LBX1P52954 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LBX1P52954 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.95■□□□□ 0.46
LBX1P52954 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.95■□□□□ 0.46
LBX1P52954 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LBX1P52954 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LBX1P52954 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.95■□□□□ 0.46
LBX1P52954 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.94■□□□□ 0.46
LBX1P52954 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LBX1P52954 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LBX1P52954 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.94■□□□□ 0.46
LBX1P52954 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LBX1P52954 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.94■□□□□ 0.46
LBX1P52954 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LBX1P52954 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.94■□□□□ 0.46
LBX1P52954 RPS9P1-201ENST00000419943 583 ntBASIC17.94■□□□□ 0.46
LBX1P52954 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 PDIA3P2-201ENST00000428073 158 ntBASIC17.94■□□□□ 0.46
LBX1P52954 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 EEF1DP4-201ENST00000446006 880 ntBASIC17.94■□□□□ 0.46
LBX1P52954 AC021723.1-201ENST00000486306 515 ntBASIC17.94■□□□□ 0.46
LBX1P52954 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.94■□□□□ 0.46
LBX1P52954 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.94■□□□□ 0.46
LBX1P52954 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 AC000095.1-201ENST00000603208 874 ntBASIC17.94■□□□□ 0.46
LBX1P52954 AC018695.6-201ENST00000614011 534 ntBASIC17.94■□□□□ 0.46
LBX1P52954 FO393412.1-201ENST00000619841 382 ntBASIC17.94■□□□□ 0.46
LBX1P52954 AC022748.3-201ENST00000621828 275 ntBASIC17.94■□□□□ 0.46
LBX1P52954 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.94■□□□□ 0.46
LBX1P52954 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LBX1P52954 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LBX1P52954 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms