Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AL139010.1-201ENST00000454878 894 ntBASIC15.67■□□□□ 0.1
RAB28P51157 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB28P51157 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.67■□□□□ 0.1
RAB28P51157 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.67■□□□□ 0.1
RAB28P51157 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB28P51157 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.67■□□□□ 0.1
RAB28P51157 AC140878.1-201ENST00000565277 250 ntBASIC15.67■□□□□ 0.1
RAB28P51157 AC106028.4-201ENST00000614509 607 ntBASIC15.67■□□□□ 0.1
RAB28P51157 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RAB28P51157 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB28P51157 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB28P51157 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.67■□□□□ 0.1
RAB28P51157 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RAB28P51157 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RAB28P51157 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB28P51157 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB28P51157 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB28P51157 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB28P51157 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB28P51157 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB28P51157 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 HAUS4P1-201ENST00000406739 1145 ntBASIC15.66■□□□□ 0.1
RAB28P51157 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB28P51157 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RAB28P51157 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.66■□□□□ 0.1
RAB28P51157 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.66■□□□□ 0.1
RAB28P51157 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 BANF1P1-201ENST00000553684 263 ntBASIC15.66■□□□□ 0.1
RAB28P51157 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB28P51157 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB28P51157 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB28P51157 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RAB28P51157 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB28P51157 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB28P51157 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RAB28P51157 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB28P51157 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB28P51157 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB28P51157 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB28P51157 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB28P51157 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.65■□□□□ 0.1
RAB28P51157 RN7SL828P-201ENST00000607615 303 ntBASIC15.65■□□□□ 0.1
RAB28P51157 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB28P51157 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms